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Evaluation of the LOINC Mapping Process Report



A. Introduction – Background, Objectives, and Overview of Hospital Involvement

The Agency for Health Care Administration (AHCA), Florida Center for Health Information and Policy Analysis, was awarded a contract from the Agency for Healthcare Research and Quality (AHRQ) for a pilot project that ran from October 2007 through September 2009 to study new ways to approach hospital quality measure. A total of 22 hospitals participated in this pilot project. Two of these participating hospitals were independent hospitals while the others were part of three hospital systems: Broward health, BayCare Health System, Memorial Healthcare System. A major interest of this pilot project was to evaluate the efforts and resources that the hospitals required to perform the tasks of this project, in particular mapping of the 31 selected clinical laboratory elements into the standardized nomenclature of Logical Observation Identifiers Names and Codes (LOINC) and joining the standardized data to the demographic and administrative data collected on all patients admitted from April 1, 2007 to December 31, 2007.

An evaluation survey was developed by AHCA’s team and sent to participating hospitals to gather their feedback on the process of translating their lab values to LOINC. The survey consisted of 20 questions that addressed the hospital description, resources needed, data compilation, LONC mapping, data transmission, communication tools, barriers encountered and their resolutions, and the lessons learned.

This document represents a compilation of the hospitals’ responses and feedback. They are displayed in the same format of the evaluation survey. Each question is followed by the answers provided by the participating hospitals.

General Hospital Description

The participating hospitals included 17 general hospitals and 5 pediatric hospitals two of theses are teaching institutions. Half of the 22 hospitals or eleven of them are high volume with 200 or more beds. Table 1 provides a description of the participating 22 hospitals including the type of the hospital and the number of beds.

Table 1. Description of Participating Hospitals

Broward Health Type of Hospital # of Beds Teaching? Other Descriptors
Broward General Medical Center Medical Center 716 No  
Coral Springs Medical Center Medical Center 200 No  
Coral Springs Medical Center Medical Center 200 No  
Imperial Point Medical Center Medical Center 204 No  
North Broward Medical Center Medical Center 409 No  
Chris Evert Children’s Hospital Pediatric Medical Center 141 No  
BayCare Health System
Mease Countryside Hospital Community 300 No  
Mease Dunedin Hospital Community 143 No  
Morton Plant Hospital Community 687 No  
Morton Plant North Bay Hospital Community 122 No  
St. Anthony's Hospital Community 365 No  
St. Joseph's Hospital Community 527 No  
St. Joseph's Children's Hospital Children’s 164 No  
St. Joseph's Women's Hospital Women’s 192 No  
South Florida Baptist Hospital Community 147 No  
Memorial Healthcare System
Memorial Hospital Miramar Community 100 No  
Memorial Hospital Pembroke Community 301 No  
Memorial Hospital West Community 236 No  
Memorial Regional Hospital Community 690 No  
Memorial Regional Hospital South Community 100 No  
Joe DiMaggio Children’s Hospital Children’s 100 No  
Miami Children's Hospital Children’s 260 Yes Free Standing
All Children’s Hospital Children’s 216 Yes  

Note: Throughout this document, the term hospital refers both to one hospital and to a hospital system. Also the hospitals are not identified by their name; instead they are listed as Hospital One, Two, Three, Four, and Five.

Hospital Resources

What technical or other resources where utilized during participation in this project?

What technical or other resources where utilized during participation in this project?

Personnel involved in this project: titles, tasks, and number of hours spent:

The number of hours each participating hospital’s personnel spent on this pilot project varied from 33 hours to 132 hours. In general most of the time spent was by the IT or systems analyst team members as shown in Table 2

Table 2: Personnel’s Title, Tasks, and Number of Hours Spent

  Personnel Title Task performed Number of Hours
Hospital One VP of Information Technology Project Manager 30
VP of Information Technology Executive Sponsor 30
I/T Sr. Systems Analyst Program download 40
Hospital Two Consulting systems analyst Procedure mapping; create the data catalog, and data extraction 21
Administrative Support Attended Conference calls and meetings 12
Hospital Three Mgr LIS Sample Data extract and LOINC mapping, point person for questions from other teams 20
CCL team Modified and ran scripts to extract data and create the data catalog 16
Database Security and FTP 5
Security team Opened ports for FTP 1
Cerner Corporate Support Helped with some database issues 3
Hospital Four Manager, IT Clinical Systems Data extract 100
Hospital Five Manager, Revenue Cycle Applications. FTP files 2
Lab System support analyst Data extraction 10
Outcomes Research Manager CV Project Coordination 120

Data Compilation

What process steps were needed to perform the data requirements of this project?

All hospitals participated in the 3M/AHCA initial meeting where they were introduced to 3M’s team and they were provided with a list of the required data elements. From that date on, hospitals worked independently and at their own pace from submitting their data catalog to 3M to uploading their data on the FTP site. Table 3 represents the hospitals’ description of the process steps performed.

Table 3 Steps Performed by Each Hospital

Hospital One 1. Identifying the data elements to be captured.
2. Data Specifications were submitted for review.
3. Conference Calls and follow-up e-mails to address any questions/ issues with Data Requirements.
4. Specifications finalized and extracts were then created and submitted via FTP.
Hospital Two 1. Map requested procedures and other data elements to clinical data repository
Hospital Three 1. Obtained script from Broward
2. Completed sample data extract and LOINC mapping
3. Modified script with our systems code values
4. Added confirmed LOINC codes to the scripts
5. Scripts were run against database and data stored
6. Security team opened ports
7. Database team sent the data via FTP
Hospital Four 1. Linking of LOINC data and AHCA hosp data to existing system tables
2. Extract of patient data from SoftLab database
3. Extract of Result data from SoftLab database
4. Conversion to required format and export
5. Upload to FTP site
Hospital Five 1. Defining data parameters
2. Development of Access queries
3. Importing of Access table into Excel
4. Transmission of file

What issues were encountered in complying with data requests?

The issues the hospitals encountered in complying with data requests varied from none, to time constraints and to the impact of their system upgrading. The following Table 4 contains the barriers that some hospitals indicated that they faced and the way they resolved them. Also in this table the lessons learned or suggestions based on these barriers are recorded. One of the hospitals’ replied "none" to all, therefore Table 4 contains the responses of only 4 hospitals.

Table 4. Issues Encountered in Complying with Data Requests

Hospital Two   Barriers How was issue resolved? Lessons learned
Staff None    
Technological Date range requested covered a different system than one in current use Look up historical data catalog; Prefer to use current lab system data
Fiscal none    
Other commitments during certain times of year Concurrent system upgrade project and move of servers off site Extended time taken to complete  
Other issues none    
Hospital Three Staff Time, Every team is under time constraints right now A couple of other projects were put on the back burner  
Technological 1. Amount of data being pulled back in report put a significant increase on system resources
2. We had the scripts error out twice after running for 20 hours due to the amount of data being returned
Scripts were broken up into smaller time frames and the scripts were run during off hours when system resources aren’t as high. Scripts can use some fine tuning to run more efficient
Fiscal      
Other commitments during certain times of year This occurred during our phase 2 scheduled build period of our EMR project so resources were extremely tight. Resources were pulled from build to complete the report  
Other issues      
Hospital Four Staff Time availability, staffing shortage Staff worked in off hours  
Technological Database structure on lab system Multiple extracts with links was required  
Fiscal      
Other commitments during certain times of year      
Other issues Definitions of data fields were changed during the course of the project. Additional programming time was required to accommodate the change in data  
Hospital Five Staff Coordination of multiple staff members and departments. Project approval by multiple departments Cross Dept Coordination, working groups and increased collaboration. Interdepartmental coordination and cross collaboration used to secure project approval. Coordinate early and often.
Technological Patient Data unavailable for year requested (2007) without significant increase in data extraction efforts Patient data extraction for 2008 was approved by AHCA and 3M Stay flexible in order to achieve your goals;
Fiscal      
Other commitments during certain times of year      
Other issues      

LOINC Mapping

What process steps were needed for your staff to perform the LOINC mapping requirements of this project?

Only one of the hospitals had used LOINC before this pilot project. The description of the process steps was presented in a similar method for all of the hospitals. Starting from the submission of the data elements, the revisions, to the LOINC mapping Final report.

Table 5. LOINC Processing Among Participating Hospitals

Hospital Two 1. Map requested procedures to current reference data
Hospital Three 1. Data looked up manually in system for requested tests
2. Spreadsheet of data completed
3. We added the LOINC codes that we could
4. Spreadsheet sent to Pam Banning for review
5. Received spreadsheet back from Pam with a few questions
6. Researched questions and responded
7. Received completed spreadsheet back from Pam
8. Supplied CCL team with list of LOINC codes to use.
Hospital Four 1. Submission of data to 3m
2. Creation of a translation table
3. Crosswalk between data extract and translation table
Hospital Five 1. Multiple teleconferences with AHCA and 3M Staff to coordinate project timelines, data extraction requirements, data parameters, and to resolve outstanding issues.
2. Multiple reviews and team meetings of AHCA and 3M project guidelines

What issues, challenges or barriers were encountered in standardizing data elements?

For some hospitals, the time required to conduct the LOINC translation was the main barrier encountered. These hospitals had to pull staff resources from other projects to complete the requirements of this pilot project. Hospitals Two and Four are examples of this, as shown in Table 5. In the first instance the LOINC processing was completed in one step, and in the second in three steps. This relatively straightforward LOINC translation can be compared to Hospitals Three and Five. These hospitals needed more assistance in mapping and translating their laboratory values to LOINC and required more assistance from 3M’s LOINC consultant to clarify the requested procedures and to update the definitions. They also used more staff resources, as more people were brought into the project. This can be seen in the number of questions about the translation process, and in the amount of training interaction that occurred. From this relatively small sample of hospitals two distinct responses to LOINC mapping and translation can be seen. One response was where the hospital found the translation relatively easy and another was where extensive re-training and communication was necessary. In all cases, a strong LOINC mapping training component is essential.

Did you benefit from consultations with 3M’s during LOINC mapping?

All participating hospitals indicated that they benefited from consultations with 3M’s LOINC mapping expert, who compiled the hospitals’ extract data and performed the actual mapping. They appreciated the explanations and clarifications of the LOINC coding and the meaning of the requested procedures. Mostly, they appreciated the professionalism displayed by 3M’s LOINC consultant (Pam Banning), her flexibility, focus on the project completion and overall great job in working with the hospital teams.

Do you think that you could have completed the LOINC mapping in-house without the help of an expert?

From the results of Table 5, it appears that some hospitals could conduct LOINC mapping on their own, while other cannot. One hospital team member wrote that it was possible to complete the LOINC mapping in-house without the help of the expert. Another hospital team completed the mapping in house using the final mapping report of another hospital in the project, and translated about 90% of the lab values into LOINC codes correctly. Only 10% of the translations had to be by 3M’s consultant.

The hospitals that needed more training indicated that they could not have completed the LOINC mapping in-house on their own without the LOINC expert’s assistance. The LOINC training also worked in reverse, with one hospital updating three clinical procedures (blood culture, ionized calcium, and PO2) following 3M’s evaluation.

What advice would be useful to other states in understanding/employing LOINC?

From the responses submitted by the participating hospitals, it is clear that up-front training on LOINC is essential for success. Also, the verification and quality assurance processes that need to occur while completing the LOINC translation need to be stressed. Converting unique lab values to LOINC can be complicated and requires attention to procedural details. This complexity needs to be stressed during the training period.

The following are the participating hospitals’ comments:

Communication Tools

Describe the communication processes

The project managers maintained ongoing communication via emails, conference calls and face-to-face meetings throughout the duration of this pilot project.

All hospital teams indicated that in general these communication processes were efficient and useful. In particular, the calls that included all of the hospitals were very useful to them. During these calls, hospital staff were able to compare issues that had come up during the LOINC mapping and trade techniques for overcoming problems. To provide more effective communication, one hospital recommended having a more structured conference call format; another hospital suggested that scheduling face-to-face meetings with the hospital teams, the Agency and 3M to address the LOINC mapping processes would have been beneficial.

Transmission of Data

Were issues encountered during data transmission?

There were issues surrounding the use of a secure FTP server both within the Agency and with the hospitals. The use of a secure FTP site for reporting by hospitals is routinely used by the Agency; however there were a number of mistakes made by the Agency IT team that could have been avoided:

For the participating hospitals, hospital firewalls and policies contributed to problems with the secure FTP site. On the one hand, hospital teams could not download the FTP software because of firewalls and hospital policies against loading non-authorized software on hospital PCs. Hospital firewalls also prevented connecting to the Agency’s secure FTP site. These problems required assistance from the IT departments, and having IT staff take care of uploading the data.

The main issues encountered were:

Please state any feedback regarding the format used to transfer the data.

For this pilot project the hospitals uploaded their data as tab separated value files. In general, the hospital CIOs agreed at the beginning of the project that sending the data as a text file would be much easier than sending it using HL7, because the dataset represented a one-time data pull that was ill-suited to an HL7 transfer. They were satisfied with the FTP transfer format because they contended that formatting the dataset for HL7 would have required considerable effort and resources. Only one hospital indicated that it would have preferred using one of their standard formats such as a comma separated value file or HL7.

Please complete this sentence: "My experience in the LOINC mapping process was…"

The survey asked an open-ended question: "My experience in the LOINC mapping process was…" The answers to this question were varied, and positive. They are listed below:

In the future, would you consider standardizing your entire data element into LOINC?

All of the hospitals answered "Yes". They all acknowledged that the future of laboratory reporting would entail standardization into a format like LOINC. The following statements are the reasons presented by the hospitals for considering standardizing their laboratory data elements into LOINC:

Describe key characteristics that led to your successful participation.

Our success in this project was due to working with the right people and maintaining ongoing communications with all members of the project. We had tremendous commitment from the participating hospitals and support from AHCA and 3M HIS. The hospitals working with us found the project interesting and useful for their future laboratory reporting. Once all the legal issues were ironed out for contacts and data exchange, and we received the go-ahead with the project, all of the teams came together to complete the project in a timely fashion.

One hospital system indicated that by having the Mater Patient index for all the hospitals, a single lab system for all the hospitals, a centralized support of lab system, an open data base connectivity with lab system database were the key for their successful participation.

A major determinant of our success came from the flexibility, collaboration, cooperation, dedication, perseverance, and coordination of all parties involved in the project.


Internet Citation: Appendix E-5. Healthcare Cost and Utilization Project (HCUP). October 2010. Agency for Healthcare Research and Quality, Rockville, MD. www.hcup-us.ahrq.gov/datainnovations/clinicaldata/FinalResultsofLOINCMapEval.jsp.
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Last modified 10/21/10